Mouse Genome Informatics practical workshop: Texas A&M University

Mouse Genome Informatics (http://www.informatics.jax.org/) is a free, highly curated resource providing searchable web and programmatic access to complete catalog of mouse genes and genome features, functional annotations, variation, gene expression data and a comprehensive index of mutant and knockout alleles, phenotypes and human disease models.

This practical workshop is designed to include short introductory sections to the features and tools, as well as hands-on, practical experience working through biologically relevant exercises. The focus of this workshop will be on the web interface, no programming knowledge or prior experience is required. Attendees are encouraged to bring their own research-specific questions.

When: Thursday, April 20, 11pm-1pm
Where: Veterinary Medicine Building 2, Room VIDI 115 (668 Raymond Stotzer Pkwy)
Cost: free

Contact: Meiyee.Law@jax.org

** Please bring your own laptop **

*** Complete the survey below to register for the workshop ***

Question Title

* 1. Contact Information

Name

Institution/Affiliation

Email Address

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* 2. Role

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* 3. Please select those that apply (to assist with tailoring the presentation)

I work with mice or mouse data in my research

I work with humans or human data in my research

I work with other model organisms or other organism data in my research

I work with large datasets (expression profiling, genome or exome sequencing, etc)

Question Title

* 4. How often do you use MGI?

several times a week

several times a month

I rarely use MGI

I have not used MGI before. I have used:

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* 5. MGI tools and resources that I am interested in learning about:

genes and genome features

genome sequence variation (SNPs, etc.)

gene expression (e.g. immunohistochemistry, RNA in situ, western blot)

gene function

mutant alleles and phenotypes

finding mouse models for phenotypes and/or human diseases

identifying Cre alleles based on expression pattern

bulk data analysis

where to find available mouse strains and mutants

Other (please specify)

Question Title

* 1. Contact Information

Question Title

* 2. Role

Question Title

* 3. Please select those that apply (to assist with tailoring the presentation)

Question Title

* 4. How often do you use MGI?

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* 5. MGI tools and resources that I am interested in learning about:

Question Title

* 6. Please provide any additional comments or topics that would make this workshop most helpful to you.